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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|23125759
Protein type: Transmembrane
Type Confidence: 0.93
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSLNCATFV DLLSYRSLSQ PNQIAYTFLV DGDTEEVKLT YQELDQKARA IAVELQSLKA  60
   61 APGERALLLY PSGLEFIVAF FGCLYAGVLA VPVYPPRRNQ RMTRLQAIVK DSEARFALTT 120
  121 ASVLTNIQQG FAQEPELTAL HCIAIDKIVS DASNWQKPPL EKSTLAFLQY TSGSTGTPKG 180
  181 VIVTHGNLLQ NSEYIKSAFE LTPNSVSVTW LPSFHDMGLI DGVLQPLYTG FPSVMMSPAS 240
  241 FVQQPIRWLK AISDYKATHC GGPNFGYELC VSKITPEQRA NLDLSSWCSA YSGAEPVRRE 300
  301 TLEKFAATFK SSGFQAKFFY PCYGMAEATL MISGGGVADE PVYCVVDPKA LEKNQIIQVS 360
  361 EDTPKVKHLV GCGYAWLDTK IAIANPQSLT LCAPEQVGEI WVSGSSIAKG YWNRPEQTKE 420
  421 TFHAYLADTA EGPFLRTGDL GFLKDGQLFI TGRLKDVVII RGCNHYPQDI ELTVEQSHQA 480
  481 LKAGSGAAFS VDIDGEEQLV IVQEVERTYL RHLNLDEVVE AIKTSVSQIH ELQVYAVLLL 540
  541 KTGSIPKTSS GKIQRHACRA GFLAGTLNAL NTVDVVIEPQ LQNPKESKKM QFSLLYFSSN 600
  601 EAEFSDEKYK LFLEGAKFAD RNGFTAVWTP ERHFHAFGGL YPNPSVLSAA LTSLTKRIRL 660
  661 RAGSVVLPLH NPIRVVEEWS VVDNLSHGRV DLAFARGWNP NDFVLSPDTH ADSKEVMFSG 720
  721 IQTVQKLWRG ENISLPNGVG KQTDIKVYPL PMQRELSIWI TCTGGKERFI EAGASGFNIL 780
  781 TALLFQPVEE LAQKIALYRE TRKQHGYDPD SGQVTLMLHT FIGEDIKVVR NQVREPFIEY 840
  841 MKSSVNLWRH GSDDLDKLTE TEKANLLAYA FERYFHTSAL FGTPSTCLEM VQRLHEIGVD 900
  901 EIACLIDFGI DGNTVLASLD SLNNLRQLVN GVDEPSIKET IESYNQPKTD VLKQTNNAII 960
  961 NNSLPAFSIE TSLKIPSRQN EEVQVPQGSL LQWIGEVIVQ QIANSLGKKS SQISLDKSFY1020
 1021 SFGIDSLKAV EIMETLGEKF GFSISPTLLF EYPTPTEFAL YLIQEQKTQL QKYLLVNWEP1080
 1081 AKLWAVNLER QKAVVLSNKL FNPASTKVVE PINDRIRAED IAVIGMSGRF PQSPDLQSFW1140
 1141 ELLSQGKNAI AQVPSLRWNL SDWYDKNPGA ANKTYSCWGG FIDHIDQFDP LFFQISPREA1200
 1201 ELMDPQQRLF LEVAWEALEN AGYSPESFAQ SQVGVFVGCS NNGYYQRIAP ALNTSDYSAG1260
 1261 IGNQNAIIAN RVSFLLNLRG PSVLIDTMCS SSLVALHMAC RSLQQGECTT ALAGGVNLLL1320
 1321 SPEYYVGMSR MKMHSPNGRC ATFDSQADGI VLGEGAGALL LKPLSQALKD GDRIYAVIKG1380
 1381 SAVNHDGRTN GITAPNSRSH AEVICQALDA AGISADTISY VEAHGTGTSL GDPIEVEGLT1440
 1441 KAFRKYTERK QFCKIGSVKT NIGHLECAAG MAQLLKVILA IQHRQIPANL HFQQPNPLIP1500
 1501 FAETPFQVNT KLCSWESSGL RRAGISSFGI GGTNAHIVIE EAPPLEPVIP EIERPKHLLT1560
 1561 FSAKTENALV QLVSRYETYL AANLDLPLGD ICFTANTGRS HFQHRLSAIA TSTSDLHQRL1620
 1621 LNFISQQEVT GIKIGRIHEN TPPKIAFLFT GQCSQYVGMG SQLYETQPTF RKILDYCNEI1680
 1681 LRPYLKEDLL KVIYPQPGET SLIDQTAYAQ PALFALEYAL VQLWKSWGVE PSVVMGHSVG1740
 1741 EYVAACVAGV FSLEDGLKLI AERSRLMQSL PQTGAMVAVF ACEADIWAIT EIDLAEVAFA1800
 1801 PRLEEKPSVG IAAYNGPQNT VISGEREAIE RICANLKAAG IQTKKLVTSY GFHSPLMEPI1860
 1861 LAEFRQVAAT VTYNAPQIDI ISNVTGQLIG EAINPEYWCD HLISSVQFAK SIQTLHTADY1920
 1921 EIFVEIGPKP ILLGMGSKCL LGKGLWLASL RQGREDWQQI LESLGELYVH GVQVEWSGFD1980
 1981 RDYFRRRVQL PTYPFQRKRY WIDAPVSTSD NKFDTQKSLP SQLSTSQFDT EIAPPLKALQ2040
 2041 PKVDTTPQIK RLDLIVSKLH SYIVNLLKAE PSEVDFYAPF LEIGADSLML IDAINYIDIT2100
 2101 YRIKITISQL FEQLTTIYAV ASYIDQNLLP EPIFVDVQLP EPVYQTQPPT PQSPPLAFVE2160
 2161 SNGNGHSHTQ QPTLKSTVQQ TAGETAVERI MLQQLQVMSQ VMSQQLDVLR ATGNVLSSNG2220
 2221 NSHLASSPPT PQNQVVKETG IAINQVQSNQ TVTKNFSPIE PPPPREINQP QQQHLKTLIS2280
 2281 NYTQKTQSSK QYAQTYRSFL ADSRAVAGFR PSTKEMVYPI IGERAKGARC WDIDGNEYVD2340
 2341 ITMGFGVLLF GHAAPFITAA VDEHLQQGIQ IGPQANYAGE VAALISELTG MERVTFCNSG2400
 2401 TEAVMTALRL ARTKTGRSKI AIFAGSYHGH FDGILAKESL DGLSTVPIAP GITANAVEDV2460
 2461 LVLDYGEPKS LEILQAHAAE LAAVLVEPVQ GRNPDLQPRE FLQQLRQFTA VAGVALIFDE2520
 2521 VLVGFRIHLG GAQAWFGIEA DIVTYGKIVG GSIPIGVVAG KASYMNGIDG GLWNYGDASY2580
 2581 PQVEKTFFAG TFNKNHLGMA VARAVLKYLK SQGPALQQHL NQRTSDLAIA LNTYFEQEEV2640
 2641 PIKIVYFGSL FRFAFSGNFD LLFYHLIYKG VYIWEGRNCF LSTAHTDEDI EYVIQAVKHS2700
 2701 IEEMRAVGFI PKRSPKLSAG SNGNGTVKTT QNGVLTKPVV TESVPVLEAI AREGKLPLSL2760
 2761 AQQRLWFLDQ LEPNSAFYNI PAAVRLQGQL NVAILEQSFR EIIRRHEALR TNFITLDGQP2820
 2821 HQVIHPNLNW QISVVDLQHL PVSKRENESQ KIAIAEAQRP FNLETESLVR ATLLVLSQTE2880
 2881 YILQVTMHHI VSDGWSMSIL IEEFTALYTA FSQGQPTPLV ELPIQYVDFA VWQRKWLQGT2940
 2941 VLQSQLTYWK KQLSGAATIL SLPTDRPRPT MQTVRGAHQP FALSFELTEA LKALSKKEGV3000
 3001 TLFMTVLAAY NILLYRYTGQ ADILVGSPNA SRNRPEIQGL IGYFLNILLL RADMSGNPSL3060
 3061 REFLKQVRKT ALGAYAHQDV PVEELIEALQ PVRDLSYTPL FQVMFILDSA TPISEMQLPG3120
 3121 VTWSSMTVEN YTSKLDLTLT LENTAQGLVG EWEYNTDLFE AATITRMAEH FRNLLEGMVA3180
 3181 NPEQRIAELP LLAAWERQQL LVEWNNTQRE YPHKCIHQLF EEQVELTPNA VAVVFGNQRL3240
 3241 TYQELNSRAN QLAHYLQELE IKPDTLIGIC LERSLDIFVG ILGILKTGAA YVPLDPDYPQ3300
 3301 ERLDYMFSDS QVSILLTAKK LVTQIPRHSA QLVYLDADWD VIATKSQQNL ASEVKPENLA3360
 3361 YVIYTSGSTG RPKGVMVPHR SLVNAYFGWE QAYELRTKTS SHLQMANFSF DVFTGDLVRG3420
 3421 LCSGAKLVLC PREWLLTPEL LYKLMQEEKV DCAEFVPAVI RNLIAYLEKT KQNLDFMRVL3480
 3481 AVGSDSWYVK EYEEFQRFCG LETRLINSYG VSEATIDSCY FESTNVKLPV EALVPIGKPF3540
 3541 PNVQIYILDS DLQPVPIGVL GELYIGGAGL AHGYLNRPDL TQERFIANPL SNEPTSRLYK3600
 3601 TGDLARFLAD GNIEFLGRID NQVKIRGFRI ELAEIEAVLR QYPTVSQTVA MAREDIPGDK3660
 3661 RLIAYVVGNQ ESVPVISDLR RFLKEKLPEY MIPAAFMVLQ TIPLTPNGKV NYRELPAPEI3720
 3721 SRAGLEASFI APRNPIEEIL AQIWVDVLGV KQVGIHDNFF ELGGHSLIAT QLISRIRTAL3780
 3781 KVELPLRSLF EASTVADLAE RIALQQDAPH LNAPSLQSVV RDGQLSLSFA QQRLWFLNQL3840
 3841 EPNSALYNIA GTARLQGELN VIALEQSLGE IIRRHESLRT NFITQEDGQA VQIIRPDAAF3900
 3901 TMPVVDLRQL SASEQEIEIQ RLATVEAQQA FDLANQLLIR ATLLVLSKTE HILLFCMHHI3960
 3961 VSDGWSMGVF VQETAAIYGA FSQGQPTPLP ELAIQYVDFA VWQRQLLQGE IKESQLAYWQ4020
 4021 QHLAGATALL ELPTDRPRPA VQTFRGANQS FVLSFELTGS LILLSRQEGV TLFMMLLAAY4080
 4081 DTLLYRYTGQ TDILVGSAIA NRNHNEIEGL IGFFVNTLVF RTDVAGNPSF RELLNRVREV4140
 4141 ALGAYSHQDL PFELLVETLQ PERNLSYTPL FQVAFVLQNA PMSEIELPGL TLSSMTPDNK4200
 4201 TAKFDLTLTL ENTATGLMGV WEYNTDLFEA STIERMTGHF QTLLESVVIQ PEQRIGELPL4260
 4261 LTAKEQYQLL EEWNHTQKDY LGNICIHQFF EMQVERTPDA VALVFENQQL TYRELNQQAN4320
 4321 HLAHYLRTLG IRVDVLVGLC VERSLEMLVG LLGILKAGGA YVPIDPEYPQ ERISHILSDS4380
 4381 QVSLLLTQHR LVARLPEHQA TLVVIDESWE QIIQHSQENP ISGVKDSDLV NVIYTSGSTG4440
 4441 KPKGVMVKHS GLCNLAQAQI DLFDLLPSSR ILQFASFSFD ASIWEVVMAL GSGARLYLGT4500
 4501 KESLLPGLEL IELLRDYGIT HITLPPSALA VLPQAELPAL QNIIVAGEAC APDLIKQWSV4560
 4561 GRRFFNAYGP TETTVCATVA ECGNGERSDK PPIGRPIPNT QAYILDSYLQ PVPIGVPGEL4620
 4621 HIGGAGVAQG YLNRPELTTE KFILNPFEDS AALASPRASA EGSRLYKTGD LARYLPDGNI4680
 4681 EY

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