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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|186469182, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRDRKLSLTA LITLILTVSL PITNLPPLFQ ASQVLAQTPA DRKAEADRLL NQGFEQLQTS  60
   61 QFTAALESGQ QALIIYREIK DRQGEGRTLI FQGAAHLSLG DKARAITYLE QGLAIAKQIN 120
  121 NQDLEKNAQV ILQLAQDQNN PRKTEADRLL EQGIKQGTTG QFEAALQSLQ QSLIIYRQIK 180
  181 DRQGEGNALG NLGLAYHFLG DYSKAIVYHQ EILAIAREIK DRQGEGNALG NLGIAYQALG 240
  241 DYSKAIDYHQ QHLVIAREIK DRRGEGNALG NLGNAYHFLG DYPKAIVYHQ EILAIAREIK 300
  301 DRQGEGNALG NLGGIYSYLK DYRQAIDYHQ QHLVIAREIK DRQGEGKALD NLGFAYSRLG 360
  361 DYKKAINYCQ QSLAIAREIK DRRGEGNALG SLALTYENLG DYPKAIDYHQ QSLAIAREIK 420
  421 DRFGEGQSLN NLGLAYQKSG NLTEAEKTLR PGIEVWESLR GTLGKNDSYK VSIFEEQART 480
  481 YRILQEVLIA QNKTNDALEI SERGRSRAFV ELLTSRLSSK NIGQIPEKPT LLLLQQIAKQ 540
  541 ENATLIEYSI IYNDVKIQGK QETHESELYI WVIKPTGEVT FRKADLKPLW QKENTTLAKL 600
  601 VTTSRNSIGA RSTAFRGIKV TYNPNAPKGK NNLKRLHELL INPIASLLSK NSSDRIIFIP 660
  661 QSSLFLVPFA ALQDADGKYL IEKHTILTSP SIQVLDLTHK QRQRIGTQPI QGKDTLIVGN 720
  721 PTMPFVAPKI GETPQQLIPL PGAEREAIAI SKLLKTEPLI GKKATEATVV KRLPQARFIH 780
  781 LATHGIFDDI QGLNSGIALT PSGKDDGLLT ASEILDLKLN AELVILSACD TGRGRLTGDG 840
  841 VIGLSRSLIS AGVPSVLVSL WSVPDAPTSL LMTEFYQNLQ KSQDKAQALR QAMLTTMKNN 900
  901 PNPVDWAAFT LIGEAE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle