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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|186686829, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGDRKLSLTV LITLILTVSQ PIANLPPLFQ APQVLAQTPA ERKVEADRLS QQGLEQFKIS  60
   61 QFEAALQSWQ QALIIYREIK DRKGEGKTLG RLGVIYDYRG DYTKAIQYQQ QSLAIAKETK 120
  121 DRLGEGKALV NLGNVYHSLG DYAKAIEYHS SSFTIAREIN DRSIEGAALG NLGLAYDAKG 180
  181 DYAKAIEYHS LSLAIAREIK DRKGEGESLG NLGIAYDALG DYAKAIEYQQ QRLAIAREIK 240
  241 DRKGEGESLG NLGSAYYSLG DYAKAIKYQQ QRLAIAREIK DRRAQKQSLG NLGVAYNALG 300
  301 DYAKAIKYQE QSLAIAREIK DRNGEGNALD NLGLAYYSLG DYAKAIEYYS SSLAIAREIK 360
  361 DRNGEGTVLG NLGLAYFLLG DDLKAIEYQE QSLAIAREIK DRNGESQSLG NLGLAYDDLG 420
  421 DYAKAIEYYQ QSLAIAREIK NRLGEGQSLG NLGNVYYSLG DYAKAIEYYQ QRLALARQIK 480
  481 NRLGEGNGLS NLGNAYGSLG DYAKAIEYQQ QSLAIAREIK DRLGEGNVLG NLGFTLNKSG 540
  541 NLAEAEKNLR AGIEVWESVR RQLGKNDSYK VSIFERQSRT YRILQRVLIA QNKTKEALEI 600
  601 SERGRSRAFV ELLTSRLSSE SAGQTVERPV DKPTISLLQQ IAKQQNATLV EYSTIGDEFK 660
  661 IQGKQEQKES ELYIWVIKPT GEVTFRSSDL KPLWQKENTT LDKLVTTSRN FIGATSTPFR 720
  721 GGIIPRENPN KPKAKQKFQQ LHKLLIEPIA DLLPKQETEK VIFIPQSSLF LVPFAALQDA 780
  781 DGKYLIEKHT ILTSPSIQVL DLTHKQKQRL GTKPIEGKDT LIVGNPTMPF LAPKIGDTPQ 840
  841 QLKPLLGAEL EAVAISKLLK TEPLIGKKAT EETIVKRLPE ARFVHLATHG LFDDIQGLNS 900
  901 GIALTPSGKD DGLLTASEIL DLKLNAELVV LSACDTGRGR ISGDGVIGLS RSLISAGVPS 960
  961 VLVSLWSIPD APTALLMTEF YQNLQKGSDK AQALRQAMLK TIQKYPQPKY WAAFTLIGEA1020
 1021 E

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle