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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|23125699, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLSPVLLAA IAITVPLGGS LSAKAETAKS SKQTTEVLTL GTNQQPEKDT SQLDSSKNLK  60
   61 SRSNLTGIIE EQKSRIVAVY PANPAAMPAV VTERSRSAGG HAYATPGVIV PTSTTLKTAQ 120
  121 QTPQINPSPT QQPSPAPDIP PPEIQQPTPS PTPETTPVPE NVNPPTTEPL LPTTPEPSTA 180
  181 PDVPFPDGQQ RTPAPRPGAT PNPQNVNPPT TPESTQPNTA PEANDPRVLV SEVLIRSQSG 240
  241 QLSPELEEQV YRVIRTQPGR TTTRSQLQED INAIFGTGFF SNVQASPEDT PLGVRVSFVV 300
  301 QPNPVLSKVE VQANPGTGVP SVLPPTTVDE VFKEQYGKIL NLRDLQEGIK QLNKRYQDQG 360
  361 YVLANVIGAP QVAENGVVTL QVAEGVVENI RVRFRNKDGQ ETDEKGQPIR GRTQDYIITR 420
  421 ELELKPGQTF NRNTVQKDLQ RVYGLGLFED VNVSLDPGTD PSKVDVVVNV AERSSGSIAA 480
  481 GAGISSASGL FGTVSYQQQN LNGRNQKLGA EVQVGERELL FDVRYTDPWI AGDPYRTSYT 540
  541 TNLFRRSSIS LIFDGKDEDI RTFDPNNPSN TDAQDRPRIL RLGGGVTFTR PLSSNPYKTS 600
  601 VWTASAGLQY QRVSARDADG NLRKTGAVFN DNGVPLDENG NPTANGQPLE IPLTLSPGGE 660
  661 DDLLLLQLGA QRDLRNNPLQ PTSGSYLRFG VDQSVPIGLG NILLTRLRGS YSQYLPIKLI 720
  721 NLTKGAQTLA FNLQAGTILG DLPPYEAFTL GGSNSVRGYE EGALGSGRSY VQASVEYRFP 780
  781 VFSVVSGALF FDLGSDLGTS TRAAEVLSKN GSGYGYGLGV RVQSPLGPIR IDYGINDDGD 840
  841 SRINFGIGER F

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle