YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|186684841, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTRKLGKLG LEVSAIGLGC MGMSEFYSGR DENEAIATIH RALELGVNFL DTADMYGPFT  60
   61 NEQLVGKAIK DRRDRVVLAT KFGNVRTEDG GWKGISGKPE YVYQACDASL KRLGVEVIDL 120
  121 YYQHRVDTTV PIEDTVGAMA ELVKQGKVRY LGLSEAAPAT IRRAVAVHPI AALQTEYSLW 180
  181 SREPEDEILP TVRELGIGFV AYSPLGRGFL SGAIASPDDL APDDYRRNAP RFQGENFYKN 240
  241 LQLVEQVKAI ATEKGVTASQ LALAWLLAQG EDIVPIPGTK RRTYLEENVA ATEITLTEEE 300
  301 LNRLEAVVPK GIAAGERYPD MSTVNR

Type	Start	End	Confidence
Signal Peptide	1	22	0.67
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	326	0.99