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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|186463884, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPQPAQIKSF RKRWFPRILK RSLIVLLVLG LLLVGLATYT VRQSFPQESG TIQLPQLKAE  60
   61 VTVQRDKWGI PHIYAANSHD LFMAQGYIHA QDRFWQMDFW RHIGSGRLSE MFGSSQVDTD 120
  121 RYLRTMGWAR VAQQEIQEIN AEMKAYLEAY SDGVNAYLKE HQGNALSLEY AVLKFLNPGY 180
  181 KPEPWQILHS LTWGKVMAYD LGTNFQSEVE RAILLKTLTP TQVEELYPPY PQDLPAILPE 240
  241 FQKGKTGEDE NSDETQFTAF GIEEVIESIT KPMMALEQLI GPTGIGIGSN NWVISGELTD 300
  301 TGKPILANDP HLGVQIPSIW YEVGLHCISK SAECPYNVTG FSFAGMIGVI IGHSDRIAWG 360
  361 VTNVLSDVMD LYIEKINPKN PNQYEVNGKW VDMKLVQETI QVAGSQPIVQ TVRYTRHGPI 420
  421 LSDVSPNLKK FQASQPLEIP QNYAVALRWT ALEPSKLGYA IPQINRAQNW QEFRTAASNY 480
  481 DVPAQNLVYA DVDGNIGYQM PGKFPIRAKG NGRYPVPGWT DEYEWQGYID FEKLPKSFNP 540
  541 SQGYIATANN LVMRKYPYLI TADWVYGYRA QRIVEMISQQ TEPISLEDVQ QIQGDDRNLN 600
  601 AQTLVPLLQS ITVDTPRLQA AQKLLQDWNL QLGMTSSAAA LFEVFWKHLL KDTFHDQLPE 660
  661 RYFPNGGDRW YAVVANLVKQ PNSSWWDNRN TPKVENRDEI LRQSFTEAVD ELERIQSKDP 720
  721 KNWNWGKLHT VTFRNATLGK SGVAPIESLF NRGAFATAGN GETVNANRWR ANKSFEVTDI 780
  781 PSLRMIVDLG KLDNSVAIHT PGQSGHAFHT HYNDMVDSWR NIEYHQMLSQ QRNVTDNTAA 840
  841 TLKLIPKLGE 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle