YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|23125111, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSNRGSAVL SSATFKVQAS STGMTDNHRL RLFSGSANLQ LSQEVARYVG MDLGPMIRKR  60
   61 FADGELYVQI QESIRGCDVY LIQPCCQPVN DHLMELLIMV DACRRASARQ VTAVIPYYGY 120
  121 ARADRKTAGR ESITAKLVAN LITEAGANRV LAMDLHSAQI QGYFDIPFDH VYGSPVLLDY 180
  181 LASKELPDLV VVSPDVGGVA RARAFAKKLN DAPLAIIDKR RQAHNVAEVL NIIGDVKGKT 240
  241 AVLVDDMIDT GGTIAEGARL LREEGARQVY ACATHAVFSP PAMERLSSGL FEEVIVTNTI 300
  301 PIPENNRFPQ LVVLSVANLL GETIWRIHED TSVSSMFR

Type	Start	End	Confidence
Signal Peptide	1	19	0.94
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	338	0.99