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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|186466123, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSAFSQQYL AEQITQVLGN SLSKEELDTC LEGLKIVEPQ VAKQFWQATT TNTGIYIVLS  60
   61 GKVRLLDSSN NLITTLFSGS SFGELTLFPE KEFSPYVARA SANLKLCYIN QETLQEVIRT 120
  121 SLSVRDRLLR RAEVWDLLLL CCYNSLIGHN GSVEETFKAL SLFERHNLES GSLSANLTKD 180
  181 IKLWLLYRGE LLDSHGQRLT PGNIHVNPKD GSLQVAQSAI AYSLSNADWQ TALQHWPQLA 240
  241 ELIDSQEPQT VLESEDFGLG TRKNSSQSPI PITPYPQRGH HLPQSPIPNI EPKQKQRKQR 300
  301 PYFPSPKVKA GHWLGRLTKR YPFFEQQSAS DCGASCLVMI SRYWGKRFNV NRIRDLTNVS 360
  361 RSGASMRGLT AAAESIGFST RPVKASFDKL AQQPLPAIAH WEGKHYVVVY EVNKKRVIIG 420
  421 DPAIGQRTLT ASEFKAGWTG YALLLQPTDL LKETQEATTA FWQFFDLVKP HSQVLLEVFL 480
  481 ASVLIQVFGL VTPLFTQLLL DRVIVQGSTL TLNAVGLGLL IFGFFRVALN GLRQYLLDHT 540
  541 ANRLSLTLLV GFIKHTFRLP LAFFESRYVG DIVSRVQENQ KIQRFLTGEA LSIGLDLMTV 600
  601 FVYLALMFWY SWQMALFSLA IVPPFVFLAL VATPFLRRIS REVFNASAKE NSYLIQSLTG 660
  661 IRSVRSMAIE QTVRWHWEEL LNNVIKKTFS GQVISNQLQI FSSSIESLVT TGLLWFGAWQ 720
  721 VIQNQLTIGQ LIAFNMLLGN VIRPFQRLVV LWNQLQEVII STERINDVLE AEPEEDLQFQ 780
  781 PRQSLSSLRG HIVFENVTFR YHPESEINVL ENLSFEIKPE QTIAVVGRSG SGKTTLSKLI 840
  841 LGLYLPTDGK ILIDGQDVTN ISLRSLRSQI GVVDQDTFLF GGTIQENISI AHPEVSQEEI 900
  901 IEAARLAGAD EFIKLMPMGY ETQIGEGGGM LSGGQRQRLA IARALLGNPC FLIFDEATSH 960
  961 LDAESERIIQ HNLTKILQGR TSLIIAHRLS TVRNADLILV LDRGILVESG THEQLIAKKG1020
 1021 HYFYLNQQQL AQTG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle