YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|186685337, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKQRLDTLL VELNLCSSRA LAQRLIQAGE VTVNQQLVDK PGTEVDISAQ INIKERSPFV  60
   61 SRGGEKLSKA LSVFAIPVAE RICLDGGIST GGFTDCLLQA GAKQVYGIDV GYGQVDWRLR 120
  121 NDSRVILRER TNLRQLRPDE LYSENDPIPD LAVVDVSFIS LTKILPALWQ LTQANREAVL 180
  181 LVKPQFEVGR SRVGKKGVVR DPNDQADAIF QVLQVAHGLG WKYKGLTWSP ITGPAGNIEY 240
  241 LLWLAMESEI PLPDLEAIKQ ITQSATTDLR KS

Type	Start	End	Confidence
Signal Peptide	1	22	0.84
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	272	0.99