YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|1086499, gi\|2...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVTVPTTLS VLNGSDTRLP CTFNSCYTVN HKQFSLNWTY QECSNCSEEM VLQFRMKIIN  60
   61 LKLERFGDRV EFSGNPSKYD VSVTLKNVQL EDEGIYNCYI TNPPDRHRGH GKIYLQVLLE 120
  121 VPPERDSTVA VIVGASVGGF LAVVILVLMV VKCVRRKKEQ KLSTDDLKTE EEGKTDGEGN 180
  181 AEDGAK

Type	Start	End	Confidence
Non-Cytoplasmic	1	128	0.96
Transmembrane Helix	129	151	0.94
Cytoplasmic	152	186	0.94