YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|219668884, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATRELYWNI EYHWLIYPML VIALGFFCYG FYQRYQLWQI GRPENRRQNI GKRIGDVLLY  60
   61 GLGHKRILKD AFPGIMHLLM FWGFALLFFA TMIVALQADL GINMFKGGLY IFIKVTANAF 120
  121 GLLAIIGCLM AIWRRYGQRP DRLDNKKDDA FVLALILTIL VTGFVIQAVR MAAVEDPWGM 180
  181 YAFIGYAMAP LFKGLSNSTL EGIHAFLWWF HFILVMVFFG YFPYSKLSHI LLAPANQFLR 240
  241 HHGPIGIPEN IDFEDESLET YGKSKLGEFS WKTLFNTDAC LRCGRCQDNC PAYLSGKHLN 300
  301 PKKVIQDMGA YLEEMGQALK TYRAANPALA VAGSGNEVAA AAEADTGAQV PSEEELGLRS 360
  361 LIGDVIAEDD LWDCTTCRSC EEQCPIFVEH VDKTIDMRRN LVLMESRFPA EAQLAFRNME 420
  421 NNSNPWGIGW SSRGDFLQSV GCSTIEENPD AEILYFPGCS GSFDARNQKV SAALVKLLKA 480
  481 AQVNFAILGS EEKCCGDSAR RLGNEYLFQA LAQENIETMN GYGVKTIVTQ CPHCFNTLKN 540
  541 EYPEFGGNYR VLHHTEYLNE LLAAGRLKLH KAGSGSERGG NSQSVTYHDS CYLGRYNTIY 600
  601 TEPRTLLQAA GFRITEMSRH HEKSFCCGAG GGRMWLEEHQ GQRINEMRTD EAMAAGAEVV 660
  661 STGCPFCLTM ISDGIAAREA VESVKVLDIA EILVERISE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle