YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114145802, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSPAPGLEN SRFGAGYARA AVKRGGRMNV GTAHSEVNPN TRVMNSRGIW LSYVLAIGLL  60
   61 HVVLLSIPFV SVPVVWTLTN LIHNLGMYIF LHTVKGTPFE TPDQGKARLL THWEQMDYGV 120
  121 QFTASRKFLT ITPIVLYFLT SFYTKYDQVH FILNTVSLMS VLIPKLPQLH GVRIFGINKY 180
  181

Type	Start	End	Confidence
Cytoplasmic	1	48	0.95
Transmembrane Helix	49	72	0.87
Non-Cytoplasmic	73	148	0.58
Transmembrane Helix	149	166	0.50
Cytoplasmic	167	180	0.57