YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|45451864
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTAPLSGFF LTSLSPSQSS LQKISLRSSP TVACLPSSSS SSSSSSSSSS RSVPTLIRNE  60
   61 PVFAAPAPII TPYWSEEMGT ESYQEAIEAL QKLLIEKEEL KTVAAAKVEQ ITAELQTGTS 120
  121 SDKKAFDPVE TIKQGFITFK KEKYETNPAL HGELAKGQSP KFMVFACSDS RVCPSHVLNF 180
  181 QPGDAFIVRN IANMVPPFDK VKYGGVGAAI EYAVLHLKVE NIVVIGHSAC GGIKGLMSFP 240
  241 LDGNNSTDFI EDWVKIGLPA KSKVISELGD SAFEDQCSRC EREAVNVSLA NLLTYPFVRE 300
  301 GLVKGTLALK GGYYDFIKGA FELWGLEFGL SETSSV

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	336	0.98