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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: DPP10_RAT
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNQTASVSHH IKCQPSKTIK ELGSNSPPQR NWKGIAIALL VILVVCSLIT MSVILLTPDE  60
   61 LTNSSETRLS LEELLGKGFG LHNPEARWIN DTDVVYKTDN GHVMKLNAET NATTLLLDNS 120
  121 TFVTFKASRH SLSPDLKYVL LAYDVKQIFH YSFTASYLIY NIHTGEVWEL NPPEVEDSVL 180
  181 QYAAWGVQGQ QLIYIFENNI YYQPDIKSSS LRLTSSGKEG IVFNGIADWL YEEELLHSHI 240
  241 AHWWSPDGER LAFLMINDSL VPNMVIPRFT GALYPKAKQY PYPKAGQANP SVKLYVVNLY 300
  301 GPTHTLELMP PDIFKSREYY ITMVKWVSNT RTVVRWLNRP QNISILTVCE STTGACSRKY 360
  361 EMTSDTWISK QNEEPVFSRD GSKFFMTVPV KQGGRGEFHH IAMFLVQSKS EQITVRHLTS 420
  421 GNWEVIRILA YDETTQKIYF LSTEFSPRGR QLYSASTEGL LSRDCISCNF RKEDCTYFDA 480
  481 SFSPMNQHFL LFCEGPKVPM VSLHSTDNPS NYYILERNSM MKETIQKKKL AKREIRILHI 540
  541 DDYELPLQLS FPKDFLEKNQ YALLLIIDEE PGGQMVTEKF HVDWDSVLID TDNVIVARFD 600
  601 GRGSGFQGLK VLQEIHRRTG SVEAKDQIAA IKYLLKQPYI DSKRLSIFGK GYGGYIASMI 660
  661 LKSDEKFFKC GTVVAPISDM KLYASAFSER YLGMPSKEES TYQASSVLHN IHGLKEENLL 720
  721 IIHGTADTKV HFQHSAELIK HLIKAGVNYT LQVYPDEGYH ISDKSKHHFY STILRFFSDC 780
  781 LKEEVSVLPQ EPEEDE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle