YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FGF8A_DANRE
Protein type:	Transmembrane
Type Confidence:	0.50
Topology Confidence:	0.47
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLIPSRLSY LFLHLFAFCY YAQVTIQSPP NFTQHVSEQS KVTDRVSRRL IRTYQLYSRT  60
   61 SGKHVQVLAN KKINAMAEDG DVHAKLIVET DTFGSRVRIK GAETGFYICM NRRGKLIGKK 120
  121 NGLGKDCIFT EIVLENNYTA LQNVKYEGWY MAFTRKGRPR KGSKTRQHQR EVHFMKRLPK 180
  181 GHQIAEHRPF DFINYPFNRR TKRTRYSGER

Type	Start	End	Confidence
Cytoplasmic	1	7	0.47
Transmembrane Helix	8	23	0.47
Non-Cytoplasmic	24	210	0.99