YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|298489, gi\|21...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNMFLLLMSL YLLGSARGTS GQSDESSGSI DHQTSVQQLS GEFFSLENPS DAEALYETAS  60
   61 GLNTLSEHGS SEHGSREHTV AEHTPGEHAE SEHASGEPAA TGHAEGEHTV GEQPSGEQPS 120
  121 GEHLSGEQSL GEHASGEQPS DEQLSGEHAS GEQPSGEHAS GEQPSGEQPS GTILNCYTCA 180
  181 YMNDQGRCLR GEGTCITQNS QQCMLKKIFE GGKLQFMVQG CENMCPSMNL FSHGTRMQII 240
  241 CCRNQSFCNK I

Type	Start	End	Confidence
Signal Peptide	1	21	0.94
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	251	0.99