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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7512040, gi|4...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRALGGVTLL LAVAICQGYE TYQRSSFRSS SSSSYGGGQT VPQLNSFASA HFNEVRELAN  60
   61 QLKQKFNVLS QGSTNFGYTS PWSASILDLS GKSTLQLDQL SSEISRQLVQ DMREGITNYH 120
  121 TIAQPNFFEA KAAELLERYS GAESASLQQT VGLGPYQPVD LSGFDEVKNY AYPAEVKVID 180
  181 GKTYVVHRNC TEATKLSDYG SSGQLNSGFL GHQQTSLPLS STTTTITRKK TIHDWVRENM 240
  241 EPSVVGYNSV VKLDGQLRNS ALNQMVPLSP GSNVVIHRFN KTITTNPDGT SSVGGSEWQQ 300
  301 RWQDGKLVYD HQQPFGQSTI PRDEQWKREE RERLFWYLTT PQRLDDWQQQ QEERLLGVVQ 360
  361 RYQVSLPVLK EFHRRELARY QALLGQYQSR VQDTSSWQRQ ERGRLDWLIH QNGFTVQDIE 420
  421 RWQNENARKL AEAARQHGIS QNQLQQFQRE ELQRLYVHFN QVNESLAPQV PSVPQTTYNY 480
  481 QSSSSLTEDN TKEQQRLEEL IRQHNATIAA LQNSIKTDQQ RLKNLSIKYQ GDMQSQTQWL 540
  541 RGEVARIGDL IKEQNEQVSK ITAWQSSERS RLENILLQHR GSVEEVQQRI NMDRNYLQNL 600
  601 ATKYQVSVEE LEKWQKEELE RLQVRGQQQL EEHIKDWQIS VSSNLRDIAT QNKLTIDEFQ 660
  661 NYIINDRSHL EEMARLYKVK VEEIEQWIKS ELKKFQSEGL LKGVEQELIQ WQQKERERLQ 720
  721 AIVQQNSLTV EQLEVRIKND QDHFFKLADK YKINVEDIQD WLKKELLRLQ SEGLVKAETL 780
  781 KEWQQQERAQ ISLLVQQNKY SLDEFERKML ADRARLQELS NTYNVKVSEI EQWIKSEGDR 840
  841 LQHEGQLRME SQLNNWQKIE RQRLLDLISK NNLSIEEIES KISKDQTHLY SLAQQHQVRV 900
  901 EEIEQWIRQQ IQKLQDQGLI EMQKLKNWQL EWRGNLTNMV QDRDFTVEEF HKWLLKDREQ 960
  961 LQSLAMQHNV QIEEIEQFVK KEEQRFIGMG LLKPSEKLTN WQEVERLHLK NLAQQQYKST1020
 1021 EQLEARLRQD RELLERLARQ YSVQVEEIES WMKQELARMR DEGQLQIDNL TSWQLAERER1080
 1081 LEALIKQNKQ WSAEELRAEL EKDREHMQTM AFQYHTSVEE IEKWLQSEIE RLKQQGKLNI1140
 1141 EQLTAWQRTE QQRILSLLQQ HSNITLEQFQ AKVHNDRRFL MNLAEQHHVH IEEVDNYVKQ1200
 1201 VIEDLRKNGQ FEIEQLQTWQ RVERDYIKSL ISEYKNSLST AEYEEKLLAD RAHLKHLADQ1260
 1261 YRINVEQIEE WMIAELKRLR GSTEETLKSL SAWQVSELER LQNLVKQQNH LTFVEFEMEL1320
 1321 NQERDRLQKL ANQYSVNVVE IEEWLRQQLI NLRTTGQAKV ENLSKWQVEE QQRLIEMLLK1380
 1381 KQQEMPYEQV ERELTQDHAR LQSLSQTHHV DIDHVDHWLR EELRRLQSSG LVQIEQQTQW1440
 1441 QQKISNGFNN WLEQQRNGAS YQDFVDFLKR DKQRMDGIAT DYHVTVEQVE KWVQKEAARL1500
 1501 SLIGVIERPE NNLKYEDISN IWVGDQTDSW KNELVTRLRS VTRQRPFTRQ EFESYLIRNK1560
 1561 PIFEQIARQY HVTIEDIHLW LDQSAKNEGL VTTEWQAKER LHIDNLINQQ LRKQQRWTIE1620
 1621 ELELRLNNDQ KHLQDAVAQY HVTVEELKVW YKDELNRLLE QRRIDRGSGI SWQNIESQRI1680
 1681 YLAIVNNPGI SRQALENRLF RDVHVRASQY QITVEELRQF ILSQLRRFSD MGLIVDNGRQ1740
 1741 ANNWHDQERK RLREVVKGVV ITEQELLDFI SQDTSFQTQL AQSYQVGLEQ LAPVQRIFIG1800
 1801 NLAREQLLEQ RRLNHLTTWQ QRERDRLYEF IGNQNMTQTE LKTWQIQDSK LLAEFAKRYE1860
 1861 ISVQQLSDWQ KKELARINQL ARYYGMSQSD LQQFREGELR QLAYINHRQL LSAAEAQKWE1920
 1921 KRHQWTLSRL QSRYGKFGQE LVAWRRTLYL LSQGLIDLPA DSGSNGGYVV DAGSTNATAV1980
 1981 YKPIFSKDRG DQPPHTYDES FVEGDEPGLE GETARPRPPN PAPIVSTPKP PLPYSRGGPS2040
 2041 GGFEYRRQDY TFNVPVGSAS ASASGGPTGS SASASASLGK WNRASGDEPL QQEVDLGQQQ2100
 2101 QIEELGWNEK LEDLGQQTQV EDTDWNQQAE DLGQQQQVQV EDDLHFDQTQ GHSSSSRSQP2160
 2161 LQQATKVEVE ATSEPSFWEK LKGKLG

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