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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7512002, gi|2...
Protein type: Globular with Signal Peptide
Type Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRTNIELER QRHLANWLMN SRPHMPGGPA AATTTSAAAA TTPAASATKG ATTTTTTTTN  60
   61 PGSTVGGAGA GTVGGNGVAT AAAAGAPSNS VAAAAAAACN GGAAVGAHHG HHSAAGARKP 120
  121 KLRRFNSHDT SSNMFSVADF ENARLARRNE IELNQRRARR VRGSANNSTY GLGSGSGLLG 180
  181 GAHSGYCDAL NGSGDYSTGD SKASKGSSEG ALTAIEFLER NSLPRVVRIL HASKSSNETL 240
  241 QSSSSHGSST AASSSSSTGA NPFGSGGSGG GNISSGNIDT GTHSSSSGGS ATGNGTGSGP 300
  301 GLSSGSGSGS GSGHQNNNGR HSSNGGTPPG HDELFLLYRL VRQRNIYHGH NAKTQASQRK 360
  361 KTLLIPQEFP GYFSMLSEKG LPTATQYGSL IQLVRERVYK FVSVDNMPAF TESSPNSTSS 420
  421 PTHEGCLPIN KGRPQYVKTT ARGGQVFRLL AVFEDGKQDQ VNMSQHGNGN ATRSHGSGYM 480
  481 GREKEKNRYA QLLNENRQVL YVPLSTKGKF YEIEPGIPQL LQKLGDAQRK LNPECVHRLS 540
  541 ALVTAAKQLP LTLRYISGPG GPDIPEQLCI SQVSKEDVVV GCSIEDVDTQ TPLQLRKFYP 600
  601 SRDIQLVKSY LGFDSEQRML ANTNVQNMLK FCQFNCDPFL KLVEIELIQR SERSGSKNRE 660
  661 GLRILKPLHF PKILRREKSS MAAAHEKEDS IIFLSKSDLE NLEAKEAAAS AAAHSESSLN 720
  721 RISERMRVFQ STKKKWFGKH HPQQQQPQIE KHQSDLDLDE QAKRMSMERY TDMSKLLQER 780
  781 FGSNPEQPEQ DAISLNSTAA SDTETTMLTT MEPRSLDTMM QKSMSLQDIE LLNGQCKQRP 840
  841 DLLASHNHND AISEAGTELE DVENQTPPPQ SFITEKLYNE FHVKTRQYSK SSSSLHQLPL 900
  901 FSLPQKLQLH EAEKEKRHLM LLKAQQQALT KEPVTGRRAA GGVSLLGGGL NQLAISPASL 960
  961 VEDDLPYSSV RDSLVISGGD CLRSESASRP VPAVDYTKEN IYAEICPSHT VDTFSGATQL1020
 1021 THVPDDDGDY ASLKYSVNGP QSVSRIEVNG ATAAVKSSAI SYHTVYLGEE PLGERHAAHI1080
 1081 TTVELAGEDN IYNTLK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle