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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|13384201
Protein type: Globular with Signal Peptide
Type Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVVLASLGIG SLVWAEDQEE AWIDGKVVGV NGEKIEVLCT SGKTVVVNSS NVYPKDAEAP  60
   61 PSGVDDMTKL AYLHEPGVLS NLKSRYDINE IYTYTGNILI AVNPFRRLPH LYDSHMMAQY 120
  121 KGAAFGELSP HPFAVADAAY RVMINEGISQ SILVSGESGA GKTESTKLLM HYLAYMGGRA 180
  181 STGGRSVEQK VLESNPVLEA FGNAKTVRNN NSSRFGKFVE IQFDQKGRIS GAAIRTYLLE 240
  241 RSRVCQLSDP ERNYHCFYML CAAPEEELQR YKLGNPRTFH YLNQSNCYEI DGLDEYKEYV 300
  301 ATKNAMDVVG ISSKEQEAIF RVVAAILHLG NIEFSKGLEM DSSVPKDEKS WFHLKTAAEL 360
  361 FRCDTKALED SLCKRVIVTR DETITKWLDP ESAVTSRDAL AKVVYSRLFD WLVDKINSSI 420
  421 GQDHESKYLI GVLDIYGFES FKTNSFEQFC INLTNEKLQQ HFNQHVFKME QEEYTKEEIN 480
  481 WSYIEFIDNQ DILDLIEKKP GGIIALLDEA CMFPRSTHET FAQKLYQTFK NHNRFSKPKL 540
  541 SRSDFTIGHY AGDVTYQTDL FLDKNKDYVV AEHQSLLNAS SCSFVSSLFP PSEESSKSSK 600
  601 FSSIGSRFKQ QLQSLLETLS STEPHYIRCV KPNNLLKPAI FENHNVLQQL RCGGVMEAIR 660
  661 ISCAGYPTRK PFYEFVDRFG ILAPGVFTGS SDEINACKSL LEKVGLEGYQ IGKTKVFLRA 720
  721 GQMAELDARR TEVLGRSASI IQRKVRSYMA RKSFILLRRS VLQIQSVCRG DLARHIYGGM 780
  781 RREASSIRIQ RNLRMHLARK AYKDLCCSAI SIQTGIRGMA ARNDLHFRKQ TKAAIIIQSH 840
  841 CRKFIAHLHY TELRKAVLTT QCAWRGKVAR KELRALKMAA KETGALQAAK NKLEKQVEEL 900
  901 TWRLQLEKRM RADLEEAKTQ ENSKLQSALQ DVQLQFKEAK DLLLKEREAA KKLAEQAPVI 960
  961 QEVPVIDHGL MDKLAAENEK LKILVSSLEV KIGETEKKYE ETSKLSAERL KQALEAESKL1020
 1021 VQLKTAMHRL EEKVSHMKTE NQNLRQELSS SPVKRGIEYA SVPTTKIQEN GNIVNEDSRS1080
 1081 SESQPSTPAK NTGTGTESDS NFKRPPIDRQ HENVDALIDC VMKDVGFSQG KPVAAFTIYK1140
 1141 CLLHWKSLEA EKTSVFDRLI QMIGSAIEDQ DDNEHMAYWL SNTSTLLFLL QRSLKPAGGP1200
 1201 GGSSARKPPQ PTSLFGRMTM GFRSSSSSVN LAAAAAALEG VRQVEAKYPA LLFKQQLTAY1260
 1261 VEKIYGIIRD NLKKELGLFL SLCIQAPRTS KGGALRSGRS FGKDSPTNHW QSIIDCLNTR1320
 1321 LSTLKENFVP PIIVQKIFAQ VFSYVNVQLF NSLLLRRECC TFSNGEYVKS GLAELEQWCC1380
 1381 QAKEEYAGSA WDELKHIRQS VGFLVIHQKY RISYDEIIND LCPILSVQQL YRICTLYWDD1440
 1441 NYNTRSVSPD VISSMRILMT EDSNSAASNS FLLDDNSSIP FSVEDLSSSL QVKDFLDVKP1500
 1501 ATDLLENLAF QFLHE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle