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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|1110531
Protein type: Globular with Signal Peptide
Type Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAWSANKAAV VLCMDVGIAM GNSFPGEESP FEQAKKVMTM FVQRQVFSES KDEIALVLFG  60
   61 TDSTENALAS EDQYQNITVR RHLMLPDFDL LEDIESKIQL GSRQADFLDA LIVCMDLIQR 120
  121 ETIGKKFGKK HIEVFTDLSS PFSQDQLDVI ICNLKKSGIS LQFFLPFPIS KNNETGHSGD 180
  181 GDLGLDHRGP SFPQKGVTEQ QKEGIRMVER VMVSLEGEDG LDEIYSFSES LRQLCVFKKI 240
  241 ERRSMPWPCQ LTIGPDLSIK IVAYKSIVQE KLKKTWVVVD ARTLKKEDIQ KETVYCLNDD 300
  301 DETEVSKEDT IQGFRYGSDI IPFSKVDEEQ MKYKSEGKCF SVLGFCRSSQ VHRRFFMGYQ 360
  361 VLKVFAAKDD EAAAVALSSL IHALDELNMV AIVRYTYDKR ANPQVGVAFP YIKDSYECLV 420
  421 YVQLPFMEDL RQYMFSSLKN NKKCTPTEAQ LSAIDDLIES MSLVKKSEEE DTIEDLFPTS 480
  481 KIPNPEFQRF FQCLLHRVLH PQERLPPIQQ HILNMLDPPT EVKAKCEIPL SKVRTLFPLT 540
  541 EAVKKKDQVT AQDIFQDNDE EGPAAKKCKM EKEESHISIS SLAEGNVTKV GSVNPVENFR 600
  601 VLVRQKIASF EEASLQLISH IEQFLDTNET LYFMKSMECI KAFREEAIQF SEEQRFNSFL 660
  661 EALREKVEIN ELNHFWEIVV QDGVTLITKD EGPGSSVTTE EATKFLAPKD KAKEDSAGLE 720
  721 EGGDVDDLLD MI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle