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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|13324596
Protein type: Globular with Signal Peptide
Type Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKKHTNFSV LLLLIFLLIL SFGGFGYYIY QSKLNDKNRE IMLNEVKNSV IDRNYKKAYS  60
   61 VAKLLQDKYP QNEDIAMLTN TLAEIANSSP FESKDLQRDS ANQILDKIKG QDNTKTNVNE 120
  121 NFDIAFNNRY IKDSTITENY SDRNDDVGIE DEDISEFKKS KIPEKIKPNT NPKEEDQIIQ 180
  181 SPNPKLSVND QKNLFNLEKL KKNLSGKSNS ENILNNSQKI ENDKQNTNLS KEKNSENILK 240
  241 TPDNSKYSNN NNTTSLKKIP SNSQKESELS PPSQTIIGKI YRPYSYLIKK ELYEILDDIN 300
  301 TGRVTLGKNR LKELIKKGLS NKFQKVNELI ENSKNKEASN LLLTLIKKDI EPNLINIPKD 360
  361 PYKKEIFQLD KGDKKPQHPG DLKSKVHSIK PIDLENTKSR QQAIKDLNEF LKNNPNDAQA 420
  421 SKTLAQANKI QHLEDLKSRV HSIKPIDLEN TKSRQQAIKD LNEFLKNNPN DAQASKTLAQ 480
  481 ANKIQHLEDL KSKVYSIRPI DLENTKSRQQ AIKDLNEFLK NNPNDAQASK TLAQANKIQH 540
  541 LEDLKSKVHS IKPIDLENTK SRQQAIKDLN EFLKNNPNDA QASKTLAQAN KIQHLEDLKS 600
  601 KVYSIRPIDL ENTKSRQQAI KDLNEFLKNN PNDAQASKTL AQANKIQHLE DLKSKVYSIR 660
  661 PIDLENTKSR QQAIKDLNEF LKNNPNDAQA SKTLAQANKI QHLEDLKSKV HSIRPIDLEN 720
  721 TKSRQQAIKD LNEFLKNNPN DAQASKTLAQ ANKIQHLEDL KSKVYSIRPI DLENTKSRQQ 780
  781 AIKDLNEFLK NNPNDAQASK TLAQAYENNG DLLKAENAYE KIIKLTNTQE DHYKLGIIRF 840
  841 KLKKYEHSIE SFDQTIKLDP KHKKALHNKG IALMMLNKNK KAIESFEKAI QIDKNYGTAY 900
  901 YQKGIAEEKN GDMQQAFASF KNAYNLDKNP NYALKAGIVS NNLGNFKQSE EYLNFFNANA 960
  961 KKPNEIAIYN LSIAKFENNK LEESLETINK AIDLNPEKSE YLYLKASINL KKENYQNAIS1020
 1021 LYSLVIEKNP ENTSAYINLA KAYEKSGNKS QAISTLEKII NKNNKLALNN LGILYKKEKN1080
 1081 YQKAIEIFEK AIINSDIEAK YNLATTLIEI NDNTRAKDLL REYTKLKPNN PEALHALGII1140
 1141 EYNENNNDQT LRELIKKFPN YKKNENIKKI IGI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle