YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|9754886
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMTPMWISLF KVLLLLFAFF ATTSADSAPF MPIPTQHDDP TQKQKQNQDQ SPIPETNRHY  60
   61 HQYHSLIQPD QYFKVQRSPN GKLNLVFNDT FVSLQRTDTE VQSEQPIPPR HPSDTFVFPD 120
  121 SPIAKYRPPQ SPARPLRNDT KEHNPCAKDE SQHLRNFCTN VDDYPDLSGL THKLKNNFAK 180
  181 FFSNDLQPTD VSSRVGGSDE RFLCRSIRKL VYPKKGLRAD DTWQLIVNND EYKQAIQIEE 240
  241 CEGADQPCDF AANFPQSYNP ICKQHYTQQT LASIKSDGEL DVVQNSFKIP SCCKCALKTG 300
  301

Type	Start	End	Confidence
Signal Peptide	1	27	0.97
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	300	0.99