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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|2129667, gi|9...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EFISKFSDFK NNKKLILSSA AIALLLLASI VGIAATTTNQ NKNQKITTLF STSHAILKSV  60
   61 CSSTLYPELC FSAVAATGGK ELTSQKEVIE ASLNLTTKAV KHNYFAVKKL IAKRKGLTPR 120
  121 EVTALHDCLE TIDETLDELH VAVEDLHQYP KQKSLRKHAD DLKTLISSAI TNQGTCLDGF 180
  181 SYDDADRKVR KALLKGQVHV EHMCSNALAM IKNMTETDIA NFELRDKFFN LHQQQQRKLK 240
  241 EVTGDLDSDG WPKWLSVGDR RLLQGSTIKA DATVADDGSG DFDNGSAAVA AAPEKSNKRF 300
  301 VIHIKAGVYR ENVEVTKKKT NIMFLGDGRG KTIITGSRNV VDGSTTFHSA TVAAVGERFL 360
  361 ARDITFQNTA GPSKHQAVAL RVGSDFSAFY QCDMFAYQDT LYVHSNRQFF VKCHITGTVD 420
  421 FIFGNAAAVL QDCDINARRP NSGQKNMVTA QGRSDPNQNT GIVIQNCRIG GTSDLLAVKG 480
  481 TFPTYLGRPW KEYSRTVIMQ SDISDVIRPE GWHEWSGSFA LDTLTYREYL NRGGGAGTAN 540
  541 RVKWKGYKVI TSDTEAQPFT AGQFIGGGGW LASTGFPFSL SL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle