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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|162463389, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.46
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTHAASRRS SSSSAVAKRP AIAEGATKAA GPGPTAAQAK KRTALVNITN VAAPGARVAA  60
   61 VGKVAPPVTG AKLNPATSGA PLKKPSLANA RTIRGSAAKS ASIKPAPPVS RHDSSSEQKH 120
  121 NVPVPTTVHV PSRAPALVPY SSFVSPGRSG DSVSTDETMS TCDSMKSPDF EYIDNGGCSM 180
  181 LASLQRRADE HLRTSEDRDV EENKWKKNGP APMEIDSICE VDSNFEDPQL CAALASDIYM 240
  241 HLREAEMKKR PSTDFMETIQ KDVNPSMRAI LIDWLVEVAE EYRLAPDTLY LTVNYIDRYL 300
  301 SGNEINRQRL QLLGVACMLI AAKYEEICAP QVEEFCYITD NTYFRDEVLE MEASVLNYLK 360
  361 FEMTAPTAKC FLRRFARSAQ ACDEDPALHL EFLANYIAEL SLLEYSLLSY PPSLIAASAI 420
  421 FLARFVLQPT KYPWNSTLAH YTQYKPSELS ECVKALHRLS SVGPGSNLPA IREKYSQHKY 480
  481 KFVAKKQSPP QIPAEFFRDA AC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle