YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|2326188
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLKSLFVSA PLLWRGVTAL PAGPGSWTHG NSTIVSSSDF SAAAAYNLID TYDASNWASK  60
   61 FNFEDIADPT HGFVDYVTLQ QAQQYGLFKT QNNQVYMGVD STSTLNPNGP GRRSVRIQSK 120
  121 TAYNRALVIA DFAHVPGSAC GSWPAFWMVG PNWPNQGEID IYEGVHLSSS NQVTLHTSPG 180
  181 CNPSIGPGGE TGRRLAGDCG ADGGFNGCGI QADNPVSFGT PFNANGGGVY ATLWTSSGVK 240
  241 VWYFATRNIP ANIKSGNPDP SAWGTPIANF GNNGCDFDAK FRDLNIVFDV TFCGDWAGGV 300
  301 WGSTTRAQVN PSCVAYVASQ PQNFSESYWL INSVKVYSV

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	339	0.99