YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|1354515, gi\|7...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTASINSWC LTSVSASKKS LPALRPSVFA SLNSSVSPPT LIRNQPVFAA PAPILYPRRG  60
   61 EEMGNDYNEA IESLKKLLSD KEELKTVAAA KVEQITAELQ TVSSSDPKAF DPVEKIKSGF 120
  121 IHFKKEKYDK NPGLYSELAK GQSPKFMVFA CSDSRVCPSH VLDFQPGEAF VVRNVANMVP 180
  181 PYDKTKYAGV GAAIEYAVLH LKVEYIVVIG HSACGGIKGL MSFPYDGTTS TDFIEDWVKV 240
  241 CYNAKTKILA EHANSPFPDM CTQCEKEAVN VSIGHLLTYP FVRDGLVNKT LGLKGGYYDF 300
  301 VKGSFELWGL EYSLSPSLSV

Type	Start	End	Confidence
Signal Peptide	1	16	0.72
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	320	0.99