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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|1806583
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRKELVLLF LLFLQPGHGI PLDDYVTTQG ASLSSSTKKQ LSVGSTEECA VKCEKETSFI  60
   61 CRSFQYHSKE QQCVIMAENS KSTPVLRMRD VILFEKKMYL SECKVGNGKY YRGTVSKTKT 120
  121 GLTCQKWSAE TPHKPRFSPD ENPSEGLDQN YCRNPDNDPK GPWCYTMDPE VRYEYCEIIQ 180
  181 CEDECMHCSG QNYVGKISRT MSGLECQPWD SQIPHPHGFI PSKFPSKNLK MNYCRNPDGE 240
  241 PRPWCFTMDR NKRWEYCDIP RCTTPPPPSG PTYQCLMGNG EHYQGNVAVT VSGLTCQRWG 300
  301 EQSPHRHDRT PENYPCKNLD ENYCRNPDGE PAPWCFTTNS SVRWEFCKIP DCVSSASETE 360
  361 HSDAPVIVPP EQTPVVQECY QGNGQSYRGT SSTTITGKKC QPWTSMRPHR HSKTPENYPD 420
  421 ADLTMNYCRN PDGDKGPWCY TTDPSVRWEF CNLKKCSGTE MSATNSSPVQ VSSASESSEQ 480
  481 DCIIDNGKGY RGTKATTGAG TPCQAWAAQE PHRHSIFTPE TNPRADLQEN YCRNPDGDAN 540
  541 GPWCYTTNPR KLFDYCDIPH CVSPSSADCG KPKVEPKKCP GRVVGGCVAN PHSWPWQVSL 600
  601 RRFGQHFCGG TLISPEWVVT AAHCLEKFSN PAIYKVVLGA HQETRLERDV QIKGVTKMFL 660
  661 EPYRADIALL KLSSPAIITD KIIPACLPNS NYMVADRSLC YITGWGETKG TYGAGLLKEA 720
  721 QLPVIENKVC NRQELLNGRV RSTELCAGHL AGGVDSCQGD SGGPLVCFEK DRYILQGVTS 780
  781 WGLGCARPNK PGVYVRVSRY VSWLQDVMRN N

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle