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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|13195252
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADKVGLGVP KTSSRSSTSL PPEPIEIIRT KARTRRVRIN VGGLNHEVLW RTLDRLPRTR  60
   61 LGKLRDCNTH ELLMEVCDDY SLNENEYFFD RHPGAFTSIL NFYRTGKLHM MEEMCALSFG 120
  121 QELDYWGIDE IYLESCCQAR YHQKKEQMNE EQRREAETLR ERDGEGEFDH SCCPDKRKKL 180
  181 WDLLEKPSSS VAAKILAIIS ILFIILSTIA LSLNTLPELQ VIDEFGQAND NPQLAHIEAV 240
  241 CIAWFTMEYL LRFLSSPNKW KFFKGPLNVI DLLAILPYYV TIFLTESNKS VLQFQNVRRV 300
  301 VQIFRIMRIL RILKLARHST GLQSLGFTLR RSYNELGLLI LFLAMGIMIF SSLVFFAEKD 360
  361 EDATKFTSIP ASFWWATITM TTVGYGDIYP QTLLGKIVGG LCCIAGVLVI ALPIPIIVNN 420
  421 FSEFYKEQKR QEKAIKRREA LERAKRNGSI VSMNLKDAFA RSMELIDVVV EKSEDKPSFD 480
  481 NHLSPSRWGI PKRASSDASL RPFDRKVGSR ECFKSSSPQH LNVQKLEEMY NQMSKARSLS 540
  541 DLDKNQNASG PKLEAQNAKS GRQRNRPVSD VPHMASTDSF GSCTDELREA SKLTPSSKDD 600
  601 DKRSVKNTTS LVESSNPVET PLDTFQISPE QRSQFDYAPS GHVTYNEDEE CIVDDNTFLI 660
  661 QSINPGMRVN FLESTDDVPL TPPSTSSAQE LSISLLEDDN SPEQESSTPF PESVILARIP 720
  721 EQGLILSPKL PVGDFHPNET LSLLEEHERE STEEDIAGTS IPSPKFTAQN CTQDGVGDNA 780
  781 EGKTESNQSG HIVDNHMFTP EIHLMPGDGD ISQTSM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle