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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|11359465
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.44
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANAEGAPSI TASERERTVS RASQTGIPRS PMVGPDRGRP RPRKPPMARR TSSNAQAPHR  60
   61 GEVFSVDDDI TEVEADAAER QKSYSGSTAR RRNLLPAPLS RVHSILDEDG ANDSRDRDTP 120
  121 DVIEEVDTPG QEGDLNLPPP AEEDSAEGET PVEDDDGDIS DAESFTLKDR QQAINETHPF 180
  181 GIRLWKPALY KKHRSVQKTA EGDIHSSPGG HVSRWLLFFN IMWTLAFGWW MSLIAYTGAI 240
  241 VCFVFAAAPS GREYGRVLWG LAGYLFYPFG KFIRLEQQDG YLDEDQDEGR SISEYEQWQS 300
  301 GDLEDGRLFF GPERDRSIIG HSRRSLDSEP DETESLLGRG RGHGSDSDLP RMKRRLFGRG 360
  361 QWNVGRVIYF LFFYTMIMPS LFIVSAICWF LVFWIPMGKV TMLLIDHLRR HPLALWFESD 420
  421 ISTARASTTP HSSILICTYR AVGIKYWKYT IDGTNIFLVN MMAIVIFVIF DWIVLEGVLE 480
  481 IHNFFTSPAF LFVTGLLSII PLAYFIGQAV ASISAQSSMG FGAAINAFFS TIVEVFLYCV 540
  541 ALQQGKAQLV EGSIMGSIFA GILFLPGISM CCGAIKRKTQ RFNAKSAGVT STMLLFAVIG 600
  601 AFGPTLFYQI YGTHELTCQD CLYFDHPRGS VRDCRRCYFS QTPAMNDRFY LEAVRPYCYI 660
  661 AAGMLFLSYI IGLWFTLRTH AAVIWNTEAD EKKHEENTAR NRGGHDAPNW SRLKSSIILM 720
  721 GATVLYAVIA EILVDTVDVV LESFEIDEKF LGITLFALVP NTTEFLNAIS FAMNGNIALS 780
  781 MEIGSAYALQ VCLLQIPALV LFSAIYPPDV PVADMARYTF SLLFPQWDMV TVILCVFLLS 840
  841 YMYGEGKSNY FKGSILLLSY LVVVIGYYFS GYSTGLEKSN SGISRFDTLG DDGQYMSYGF 900
  901 KTVGRGTSGV AY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle