YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|1923254
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKDRLAALK AAQSDDDDEP GEHMPMTMNV DGGKFMEEFF EQVNEIREMI DKIAVDVDEV  60
   61 KKKHSAILSA PQTDDKTKEE LEDLMAEIKK TANKVRGKLK VLEQKIEQEE ETNKSSADLR 120
  121 IRKTQHSTIL RKFIEVMNQY NAAQVDYRDG CKKRLQRQME ITGRATTNEE LEDMLESGNP 180
  181 AIFTQGIITD TQQAKQSLMD IEARHNDIMK LEQSIKELHD MFMDMAMLVE SQGEMIDRIE 240
  241 HNVEKAVDYV ETAAADTKKA MKYQSAARKK KIIILICVSV LILIVGGSLL GIFIP

Type	Start	End	Confidence
Cytoplasmic	1	271	0.98
Transmembrane Helix	272	294	0.95
Non-Cytoplasmic	295	295	0.98