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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|1773061
Protein type: Globular with Signal Peptide
Type Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRNLRLDWR ALALLGALLS FIIAWRGLVS AMPLMAMDNN LTDSSGSTNT STSSTSKYNS  60
   61 TNNSNLFSNS YLQSDHSRSS LVPSAVSERS VNQPTNQSIN AEFNQSLSTH PTAITSTPQT 120
  121 QTQTQIQSQY PSQAEDSDQL EEPLGFVISA MPNEHLAVLS RTERSIRHQN QQQQKKHHHH 180
  181 HQQQQQQQHQ QQQPMSPADN NFIGSKSKRL SNPRSSLNIN SSSSNTPISN LDRNERSTVP 240
  241 QSHLAWTSRK IQLYIKNRIL QILRDGVVNG TQDENSEFTI LQRSTVDVGR IKLQSVATCL 300
  301 YLCMDACGVP YGSKDFTDDC VFNENMGLQN YNTYSSTYHS QARRVFYLAL NGSGQPRRTQ 360
  361 IPASRSLGKL STYTNAITET VPQERVEQLI AKNFGANRVK HGVRQLCDTG KPLIELIDVA 420
  421 RFKAPPHCSS NTSGSSSSIS SSSSSSSKSS SNSSSSYVPV SAISSLSSIS NSSQSESGHI 480
  481 SSSLSGTSNS NSSSNSSSSN SSSNSSRPSG SKANKKKKPK CKPHEQEDTH NCQKRGGAGA 540
  541 GALRKLGPKA KRCKELREKA AAEKRAPPNC GKKNGARKNP TEAAKAVQQR PKGNIQHGGK 600
  601 KKPNKAGKQR QNGGKKQQQQ QQHQLQQQPL QHQAKSISGG KRKHRKLDAS TTTTMATSLG 660
  661 TPPSSHWESS SPLPAFSLSE TSDRVERNVR MSSGEEQDQD NDQDQEQSDP GEQGEEETEG 720
  721 DGGSLEDASY EDSSSEAQGR SGAGGDDSLY YDFLCLQLIA MVLLRKRAIL 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle