YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|1280434
Protein type: Transmembrane
Type Confidence: 0.92
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLLYALRVR IMNFMIFFLL IILMPGLPPR TTFPFKDYIV TPPKDLKGAL ESNFHLEGAE  60
   61 RLLEGRVYGP ECLIARNNEI YTGIHGGEVI KLTSNHVTHV TKIGQPCEDI YEESRCGRPL 120
  121 GLAFDTQGNN LIIADAYYGL WQVDLGTNKK TLLVSPAQEL AGKSINRPAK IFNGVTVSKE 180
  181 GDVYWTDSSS DFTIEDLVFA SFANPSGRLF KYNRSKNVSE VLLDELAFAN GLALSPNEDF 240
  241 IVVAETGAMR LTKYHLKGAK AGQSEVFVDG LPGLPDNLTP DAEGIWVPLV QSADSEHPNG 300
  301 FTLFTRFPSV RLFLARMLAL FELPFRYLNS VYPNKFSQRF IHFVGHMESI TVLAPKRTTV 360
  361 VRVDWNGNIV GSLHGFDKSA ATISHVLEFQ DFLFLGSPTN QYLARVKSPK AKQPTLKVRN 420
  421 VRVEGEGLEA SIGVPPSKAT PKPKAAPSTT TPKPTTTTTT TTPKPTTKTT TTTTTPKPTT 480
  481 TTTTKKPTTT TTTTTTTPKP TTTKPPTAKP STTTTPTTTP KPTTTTTPTT PTTPTPEPSK 540
  541 PKVKRTVPEK PAPVEEEIPS DTQPPKKEKL KVINKQGVNV EL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle