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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|13183005
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTKRFKINA ISLSIFLAYA LTPYSEAALV RDDVDYQIFR DFAENKGKFF VGATDLSVKN  60
   61 KQGQNIGNAL SNVPMIDFSV ADVNRRTLTV IDPQYAVSVK HVKGDEISYY GHHNGHLDVS 120
  121 NDENEYRSVA QNDYEPNKNW HHGNQGRLED YNMARLNKFV TEVAPIAPTS AGGGVETYKD 180
  181 KNRFSEFVRV GAGTQFEYNS RYNMTELSRA YRYAIAGTPY QDVNVTSNLN QEGLIGFGDN 240
  241 SKHHSPEKLK EVLSQNALTN YAVLGDSGSP LFAYDKQEKR WVFLGAYDYW AGYQKNSWQE 300
  301 WNIYKKEFAD KIRQRDNAGT IKGNGEHHWN ITFGTNSKIG STAVRLAGNE KDANNGQNVT 360
  361 FEDNGTLVLD QNINQGAGGL FFKGDYTVKG INNDITWLGA GIDVTDGKKV VWQVKNPNGD 420
  421 RLAKIGKGTL EINGTGVNQG QLKVGDGTVI LNQQADADKK VQAFSQVGIV SGRGTLVLNS 480
  481 SNQINPDNLY FGFRGGRLDA NGNDLTFEHI RNVDEGARIV NHNTSHASTI TLTGKSLITN 540
  541 PNSLSVHSIQ NDYDEDDYSY YYRPRRPIPQ GKDLYYKNYR YYALKSGGSV NAPMPENGVT 600
  601 ENNDWVFMGY TQEEAKKNAM NHKNNQRISG FSGFFGEENG KGHNGALNLN FNGKSAQNRF 660
  661 LLTGGTNLNG KISVTQGNVL LSGRPTPHAR DFVNKSSARK DAHFSKNNEV VFEDDWINRT 720
  721 FKAAEIAVNQ SASFSSGRNV SNITANITAT DNAKVNLGYK NGDEVCVRSD YTGYVTCNTG 780
  781 NLSDKALNSF GATQINGNVN LNQNAALVLG KAALWGQIQG QGNSRVSLNQ HSKWHLTGDS 840
  841 QVHNLSLADS HIHLNNASDA QSANQYHTLK INHLSGNGHF HYLTHLAENL GDKVLVKESA 900
  901 SGHYQLHVQD KTGEPNQEGL NLFDASSVQD RSRLSVSLAN NHVDLGALRY TIKTENGITR 960
  961 LYNPYAENRR RVKPVPSPAT NTASQAQTDS AQIAKPQNIV VAPPSPQANQ AEEAKRQQAK1020
 1021 AEQVKRQQAE AERKSAELAK QKAEAEREAR ELATRQKAEQ ERSSAELARR HEKEREAAEL1080
 1081 SAKQKVEAER EAQALAVRRK AEAEEAKRQA AELARQQEEA RKAAELAAKQ KAETERKAAE1140
 1141 IAEQKAEAER EAAELAKQKA EEEGRQAAQS QPKRRNRRAI PPELSSDATT RALPRIARNS1200
 1201 NPDASDYEKI PLDALEDEDV SESVDTSDKQ PQDNTELHEK VETVSLQPRA AQPRAQAAAQ1260
 1261 ADAVSTNTNS ALSDAMASTQ SILLDTGASL TRHIAQKSRA DAEKNSVWMS NIGYGRDYAS1320
 1321 AQYRRFSSKR TQTQIGIDRS LSENMQIGGV LTYSDSQHTF DQASGKNTFV QANLYGKYYL1380
 1381 NDAWYVAGDI GAGSLRSRLQ TQQKANFNRT SIQTGLTLGN TLKINQFEIV PSAGIRYSRL1440
 1441 SSADYKLGND SVKVSSMSVK TLTAGLDFAY RFKVGNLTVK PLLSAAYFAN YGKGGVNVGG1500
 1501 NSFAYKADNQ QQYSAGAALL YRNVTLNVNG SITKGKQLEK QKSGQIKIQI RF

YRC Informatics Platform - Version 3.0
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