YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|1763985
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKRKALQLA VSVGIAAMSG AVYANGSDMT NPDSGVVVGY WQNWCDGGGY QGGNAPCVTL  60
   61 DEVNPMYNIV NVSFMKVYDV ADGRIPTFKL DPTVGLSEEQ FIDQVSELNK QGRSVLLALG 120
  121 GADAHVELET GDERAFADEI IRLTERYGFD GLDIDLEQAA VTAANNQTVI PDALKLVKDH 180
  181 YRAEGKNFLI TMAPEFPYLT TGGKYVPYID NLEGYYDWIN PQFYNQGGDG IWVDGVGWIA 240
  241 QNNDELKEEF IYYISDSLIN GTRGFHKIPH DKLVFGIPSS IDAAATGFVK EPQDLYDAFD 300
  301 SLTAQGQPLR GVMTWSINWD MGTNKAGQAY NEQFIKDYGP FVHGQVTPPP VEGEPMLKGV 360
  361 ENTRVLHGTV FDPMEGETAT DKEDGDLTSS IDVEGYVETS VIGTYVLTYR VKDSDNNETT 420
  421 KARTVEVYSQ KPVFDGVSDT TVVLGNSFDP MAGVTANDAE DGDLTSSIIH TGSVDVNEIG 480
  481 NYTLVYRVTD SANQTVTAER KVTVTDGSNC AAAWDANTVY VEGDQVSHDG ATWVAGWYTR 540
  541 GEEPGTTGEW GVWKKASDSS CGGNPSPGGD VELSVSGLQS EYILDNGDVR IQFTLASNEA 600
  601 LDVIAKVINS AGSVVEQTNV NLTDSRTVTM DLYDVTEGQY KLEVVGTATD GEVVMVDNSF 660
  661 SVKEEGGTTP PPGNYPPYAA GTNYEAGDIV VGNDNGLYEC KPWPYTAWCA SASYAPGDSL 720
  721 YWQNAWIKL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle