YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|187027432, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTEQAIKTE EQIPLTATTE TPAETTTEAA AVVAPEEPKP KKNWFQFGKK KAAASVDEAN  60
   61 VEEGAAAGDA EEKPLKEKKM GWWSKCKTKK CENEQKEDHI AIGMDFVNRD HNGLNNHVQH 120
  121 NFDDIFGEAD SQHTWEFMWR LNASVFNWVR LFVYRFFTIL ALPFTLLFAI FFGFFAAVNV 180
  181 FVIVPFGKLI SIPGNLLAKL WNWLVHAVFD PVASAVGLIF SNFNIRKYGI NQETTAPCV

Type	Start	End	Confidence
Cytoplasmic	1	155	0.94
Transmembrane Helix	156	183	0.81
Non-Cytoplasmic	184	202	0.76
Transmembrane Helix	203	223	0.87
Cytoplasmic	224	239	0.81