YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157770057
Protein type:	Globular with Signal Peptide
Type Confidence:	0.47
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLASAWEFAK RNKGKIIAGG VLVGSAIAYI STSSKSVVLE KHTTAAELPN QARRHYIFDS  60
   61 THRSCDQSIT DLIPSVVTQI QARFDVETIQ DKLKNTPDLT AEQKIQLWDQ LKKNVFCRIV 120
  121 SVAFGFSILT LTLKAQISIL AADTCAQFEE RNKKPTWQSY IPESMSSMFV KNGSIQTDNP 180
  181 MDIGNRRIFL QCVQYFTLRG IPELMEFVAE AVSAELQHWK LTDVKTKHEM RDFFDKVSYR 240
  241 ISFSGLLTKL VAPLDEDVNA GSSVMKLLLK LTNNLESSKS IHVLSSLLDF YFSAALKMVG 300
  301 QEEQSLVKYV PAFSNSFPVL TSTAFDSPLF NSLYSSDIHQ FSVYVFNS

Type	Start	End	Confidence
Signal Peptide	1	28	0.48
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	348	0.96