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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157769963
Protein type: Transmembrane
Type Confidence: 0.69
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVDESDVKSA LNGHDRPLSI TIAIVFLKIV FFIYDIVTFI PFKIFADPAE KLEKSERVKA  60
   61 EPENGDFSTP WKNVFAKDGL MNSSFEGIHD LGTQWEECVR RYGNLPCMGT REVLKVHKEK 120
  121 QSNGKVFEKW QMGDYHWRSY AQVDKRVNMI ASGLTSLGQK EKEPIILFAE TREEWMTTAL 180
  181 ACMKMNFPIA TMYATLGDEA VTFAINEVGA KTIFTTEALI SKVKKAMSNG ATSIENIIFF 240
  241 DSVDPASRGE SVDVDLPFTL LSFDQLLSRG EREYCMSLWA HPVPIRSKKD DLAFIMYTSG 300
  301 TTGNPKGVMI SHQNIVAVTA GQAFNINLGT EDRYIGYLPL AHILEVCAEM IVFTKGVRIG 360
  361 YSSAQTLFDR APKIMKGEHG DCWVLQPTLM ACVPAVMDRI FKAVIDEVNA NSELFKQVFK 420
  421 TCYERKRSRY EEGYTSFILN KLVFNRIGKL LGGKVRQILS GGAPLSPETQ RFMNICFCCP 480
  481 VVQGYGLTET CGGGTIADIH DLSTGTVGPP LTCCEILLQE WAEAGYSPKN DPPQGEILIS 540
  541 GPNVALGYFN NDEKTNEDFV KVNGKRFFAT GDIGEFREDG SLKIIDRKKD LLKLSHGEYI 600
  601 SLGKVETNLL TNPNVDNICV YGDSDKSFLV ALVVPNQKNL TQMAEKQGVD TSDFEKVCED 660
  661 KKVVEALQKE LASYVSSKLQ RVEIPQKIFI CHEPWTPASG LLTEALKLKR KNIEKAFRKE 720
  721 LDQLYK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle