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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157769811
Protein type: Transmembrane
Type Confidence: 0.54
Topology Confidence: 0.47
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASRSCICRV SAAIILVVGI LLLVAGLVMV LGVFPNIVHN QINDGKVLGT NDDGTLNSFT  60
   61 DSWVHSKYIS TMQYWVYDYT NTIGIMNRAL YPDVREKGPY AYDEIITMDK VNFSANGEFM 120
  121 EFRQIQTFVF NANKSCPGCD PYKDKVLIPD MGFQVGIDTI DSTVEAILKN PIAVQLCHAL 180
  181 MKKRANATIA CQNLAATIEG EIGTLISLFG VSPFVTVTVD ELLFSGYKTP FVDKFVNTAL 240
  241 GMFHFIFDTP PNPLPNPPIQ LNPLNGTSDV INTVLTGKTD PLKAGFMTEF RSISNDSMFN 300
  301 SIGSTLPPMW WPYANKTYCK DPTSALKIVG TNGDFFKNFV DKTDILPAFV SDVCRSINFV 360
  361 FDREVTVRGF KGYRFIMPPT QFDYTLDENC GFCVPLKYGA YEYPPQSACL PSGLLDISGC 420
  421 TGGPIIMSKP HFYQADRMVS RFVPRFKPTY DEDETMLDIE PNTGTVLQAQ KRLQINMLVN 480
  481 QYKHIRSYSV MRPGAYPLAW VNESFYMDQG TIDQLNSQLF DPVNLVDTIC WVAVGVGSGM 540
  541 IALAIVMVII SFCCFQDEHH KTS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle