YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|187027852, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILFKLLPLL GFLFAETIEI RSPRRTDYGD WQGWKNCPDG TYAYAVKHKV EGDQRGGDDT  60
   61 GLNAVALFCN PLHWSTYNTN REILSGEGGW GGWKGVKYCP EGLVMIGFAL RSEADQRGKD 120
  121 DVAADNFCGY CGTPDGPRDQ SNWISGDTPG WGDWTQDQFC PQGFAVCGIN TQIEGDQGGG 180
  181 DDTALNNVDL RCCRVPPVSL SCTPSYTLER LTEYDNRLGA GTIQIEYQKK ISFSRTTGST 240
  241 KTVGREEKEA VLSKVTTGVE LSAEGMYKGV TLTGKTSVNY EHRNSRETIS SHQIQTMVQE 300
  301 VMSNEKTITE TYNVPAHKGV VIEQLFMTCG NIKVGLPKIV TRSS

Type	Start	End	Confidence
Signal Peptide	1	17	0.85
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	344	0.99