YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39597821, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVNICGPSC CMHHIYNNDL TLVASPKGKT QVVTMEDEQP RQSFCTWFHS LKVQIWIAWL  60
   61 GVSAGIMAGT VFAIQYQNWI AVTMCFVSSA FATLVLHLHM AYKKTQMAGW SSTKLKCIAA 120
  121 VGATVCFVSL IAMVYCLVVA GIEHQTLDRA GLMGANLWIA AVWFMMTAKW SALTWRFARK 180
  181 YRAYCDEEIQ PLLVDSPPEY SVIV

Type	Start	End	Confidence
Cytoplasmic	1	54	0.97
Transmembrane Helix	55	74	0.94
Non-Cytoplasmic	75	79	0.81
Transmembrane Helix	80	101	0.93
Cytoplasmic	102	116	0.95
Transmembrane Helix	117	142	0.87
Non-Cytoplasmic	143	151	0.84
Transmembrane Helix	152	173	0.90
Cytoplasmic	174	204	0.99