YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157769225
Protein type:	Globular with Signal Peptide
Type Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTHLVPRILG FVLFVLGAAI LLTEVMHSYT RYIRQSETYT VTSGDSQDPP KKQKQLKTFF  60
   61 SLYRNMDEII EQNTDTIQPR VLNGSAHEFC NNTDHCIRPF MRHETRYRVR TKHYDKDHNN 120
  121 LLNLRSRRII KWLTVCSQKL CRGDNTFRHL KSLQKKYNVS QTGGWSYSMI TRDPIDRFVS 180
  181 GYVDRCIRVA EGSSPCNGCD KNMTCFILSE YERFKKQAIK GVLTNTFEDR HFYPQNWRCD 240
  241 IRSMRHKYEF IRYSSDPSQQ LMEDLFKIAR RQGVPENELE FIEDELTKNR KTTHTTAYSP 300
  301 AREFYQKRLR ENPLLMEYVV RMFYHDFVIL NYPFPEGF

Type	Start	End	Confidence
Signal Peptide	1	28	0.62
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	338	0.97