YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|2231732
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKMRLVAAAA MSLAMSTTIA ANATATSTPS AASLSTDTDK LSYSIGADLG KNFKKQGIDI  60
   61 SPAAMAKGLQ DGMSGGQLLL TEEQMKEVLN KFQKELMMKR SAEFNKKSEE NKSKGEAFLK 120
  121 DNKSKDGVVS LPSGLQYKIL EKGDGAKPAK DDTVTVEYTG RLINGQVFDS TEKTGKPATF 180
  181 KVSQVIPGWT EALQLMPSGS TWEVYIPSDL AYGPRSVGGP IGPNETLIFK IHLISVKKTD 240
  241 A

Type	Start	End	Confidence
Signal Peptide	1	23	0.95
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	241	0.99