YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|2231724
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKMRLVAAAV MGLAMTTAIA ASNTPNAATP TTPAAATSAT SLNSDTDKLS YSIGADLGKN  60
   61 FKKQGIDINP SAMAKGLQDG MSGGQLLLTE QQMKEVLNKF QKDLMAKRNA EFTKKAEENK 120
  121 IKGEAFLTAN KNKDGVISLP SGLQYKVLEK GNGAKPTKND TVTVEYTGKL IDGQVFDSTE 180
  181 RTGKPATFKV SQVIPGWTEA LQLMPAGSTW EVYVPADLAY GPRSVGGPIG PNETLIFKIH 240
  241 LISVKKSEA

Type	Start	End	Confidence
Signal Peptide	1	20	0.99
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	249	0.99