YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|2231720
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKMRLVAAAV MGLAMTSAIA ANDATNTATS ATPASNTATS ATSLNSDMDK LSYSIGADLG  60
   61 KNFKKQGIDI NPAAMAKGLQ DGMSGVQLQL TEQQMKDVLN KFQKDLMAKR NAEFSKKADE 120
  121 NKSKGEAFLN ANKSKEGVVS LPSGLQYKIL EKGNGVKPSK DDTVTVEYTG KLIDGQVFDS 180
  181 TERTGKPATF KVSQVIPGWT EALQLMPAGS TWEVYVPADL AYGPRSVGGP IGPNETLIFK 240
  241 IHLISVKKSD A

Type	Start	End	Confidence
Signal Peptide	1	20	0.99
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	251	0.99