YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|2231716
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKMRLVAAAV IGLTMSTAII AADASATATT APATSATPAT SLNSDMDKLS YSIGADLGKN  60
   61 FKKQGIDISP AAMAKGLQDG MSGGQLLLTE QQMKDVLNKF QKDLMAKRNA DFNKKAEENK 120
  121 AKGDAFLNQN KAKDGVVSLP SGLQYKILQK GDGAKPSKDD TVTVEYTGTL IDGQVFDSTD 180
  181 RTGKPATFKV SQVIPGWTEA LQLMPAGSTW EVYVPADLAY GPRSVGGPIG PNETLIFKIH 240
  241 LISVKKSDA

Type	Start	End	Confidence
Signal Peptide	1	24	0.94
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	249	0.99