YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|2231706
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKMRLVAAAV IGLTMSTAIV AADASATATP APATSATPTT SLNSDMDKLS YSIGADLGKN  60
   61 FKKQGIDINP SAMAKGLQDG MSGGQLLLTE QQMKDVLNKF QKDLMAKRTA EFSKKADENK 120
  121 AKGEAFLNQN KAKEGVVSLP SGLQYKIIQK GDGAKPSKED TVTVEYTGTL IDGQVFDSTD 180
  181 KAGKPATFKV SQVIPGWTEA LQLMPAGSTW EVYVPADLAY GPRSVGGPIG PNETLIFKIH 240
  241 LISVKKSDA

Type	Start	End	Confidence
Signal Peptide	1	22	0.98
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	249	0.99