YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|2231686
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKMKLVTAAV MGLAMSTVIA ATDATSLVTD KDKLSYSIGA DLGKNFKNQG IDINPDALAK  60
   61 GMQDGMSGAQ LILTEQQMKD VLNKFQKELM AKRSAEFNKK AEENKSKGEA FLSTNKSKSG 120
  121 VVVLPSGLQY KVIEAGTGNK PGKSDTVTVE YTGTLIDGTV FDSTEKTGKP ATFQVSQVIP 180
  181 GWTEALQLMP AGSTWEIYVP SDLAYGPRSV GGPIGPNETL IFKIHLISVK KSA

Type	Start	End	Confidence
Signal Peptide	1	20	0.99
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	233	0.99