YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|2231680
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKMKLVAAAA MGLAMTTSIA ATNNTQLTTE MDKLSYSIGT DLGKNFKRQG IDINPDMMAK  60
   61 GLKDGMNGGT LLLTDDQMKE VLNKFQKDLM AKRTAEFNKK AEQNKTKGES FLKENKQKQG 120
  121 VVTLPSGLQY KIITAGNGEK PNKEDTVTVE YTGRLIDGEV FDSTERTGKP ATFNLSQVIP 180
  181 GWTEALQLMP AGSTWEIYVP ADLAYGTRSV GGPIGPNETL IFNIHLISVK KNNA

Type	Start	End	Confidence
Signal Peptide	1	20	0.99
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	234	0.99