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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|1401350
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKLLIASLL FGSTTAFAAP FVVKDIRVDG VQAGTEGSVL ATLPVRVGQR ATDNDIANVV  60
   61 RKLFLSGQYD DVKASREGNT LVVTVMPKPV ISNVVIVGNK SIPDEAIKQN LDANGFKVGD 120
  121 VLNRAKLEEF RKGIVEHYNS VGRYNAKVDA IVNTLPNNSA EIKIQINEDD VALFKEITFE 180
  181 GNEAFSSGKL ADQMELQTDS WWKLFGNKFD QTQFNKDLET LRSYYLDRGY AQFQILDTDV 240
  241 KLSDDKKEPC LISEEGDLYT VKTRVSGGMW GGMSAELAPI LETIQLNGLF RRTSVLEVEQ 300
  301 RNKSKLGERG YATAQVNVHP TFDEQDKTIS LDFIVEAGKS YTVRQIRFEG NTSSADSTLR 360
  361 QEMRQQEGAW LSSELVELGK LRLDRTGYFE SVETKTEAIP GSDQVDVIYK VKERNTGSIN 420
  421 FGIGYGTESG LSYQASIKQD NFLGMGSSIS LGGTRNDYGT TVNLGYNEPY FTKDGVSLGG 480
  481 NVSFEEYDSS KSNTSAGYGR TSYGGNLTLG FPVNENNSYY LGVGYTYNKL KNIAPEYNRD 540
  541 LYRQSMKYND SWTFKSHDFD LSFGWNYNSL NRGYFPTKGV RANIGGRVTI PGSDNKYYKL 600
  601 NAEAQGFYPL DREHGWVLSS RISASFADGF SGKRLPFYQY YSAGGIGSLR GFAYGAIGPN 660
  661 AIYRTRQCPD SYCLVSSDVI GGNAMVTAST ELIVPTPFVA DKNQNSVRTS LFVDAASVWN 720
  721 TRWKAEDKAK FAKLNVPDYS DPSRVRASAG VALQWQSPIG PLVFSYAKPL KKYQGDEIEQ 780
  781 FQFSIGGTF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle