YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39597229, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTPNGPRVV FLIAVCCLVL GGTVCALPRV PFVVNNDVNA TKTEDKTEEK NTVVEEEKKT  60
   61 YTVGDSEGYQ EASRLLQKSL NLSLDPCEDF FEYACRSWVD AHPIPDDLTS YSQFTATREK 120
  121 VLAEMRKLYE DTTTTPTSKS IALVKQIYHT CIDTEKHNAV GARDLLEKIK TFGYWPMVHN 180
  181 EKWREASFDL TKLLSNTIQS RDVSVFFDYG PAEDSRNVSR RLLSFDQGSL GLGYSTRDYY 240
  241 LDEKKYEKQM KAYRKYTIGK VRYYTEDAGM TVNETKIESD VDEIIAFEKQ WAAILVAEEN 300
  301 RRNYTKLYNV RHFNDLKEYM PIIDWKKLTL STTPFLVHAY MKTNPIIIIS DVEYLQKMNT 360
  361 LLQNTDPRIV TNYVLLRWAG SWSQEIGKKY EDLQQEFAFQ MYGRKQRQPR WKDCVSSAGG 420
  421 KLSYASGSMY VRKYFDAKAK STTLDMIADL QEAFRNMMHA NDWMDAETKK YALEKGDQML 480
  481 KQIGYPDFIL NDEKLDDWYK GLDGAPEDTF SQLVEKSIQW RNNFYYRRLL EPVNRHEFIS 540
  541 SAAVVNAFYS PTRNAIAFPA GILQQPFFDA RFPKALNYGG IGAVIGHEIT HGFDDTGRQF 600
  601 DNVGNLRDWW DNATSSKFTE RAQCIIEQYA DVELRGTDLR INGKLTQGEN IADNGGIKQA 660
  661 FKAYKSFLEK HGGQEPRLPH FESLSSEQLF FVGYAQVWCG AKTPETKTLL LLTDPHSPET 720
  721 ARVNTVLSNQ PEFAEAFKCP AGSPMNPTKR CVVW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle